Table of Contents

Grégoire Altan-Bonnet

Ruy Ribeiro

Sean Stromberg

Anton Zilman

Fabio Zanini

Grégoire Altan-Bonnet

Here is an chapter to support the introductory discussion on Tuesday November 27th.
"Systems Immunology: a primer for Biophysicists"
"Roadmap to Immunology" (chalkboard photos): IntroImmuno1.JPG | IntroImmuno2.JPG | IntroImmuno3.JPG

Ruy Ribeiro

Paper for journal discussion:
Bendall et al., Single-cell mass cytometry of differential immune and drug responses across a human hematopoietic continuum, Science 332: 687 (2011)

Sean Stromberg

For people needing a reference for making sense of all the CD markers, figure 2 of this paper provides a nice key:
Maecker et al., Standardizing immunophenotyping for the Human Immunology Project, Nature Reviews Immunology 12: 191 (2012)

Anton Zilman

Old classics by J.T. Jaynes on information, entropy and statistical inference:
1. Information Theory and Statistical Mechanics, Phys. Rev. 106, 620–630 (1957)
2. Information Theory and Statistical Mechanics II, Phys. Rev. 108, 171–190 (1957)

Alan Perelson

Fabio Zanini

A merge of all (available) talks' conclusions for a nice comparison and overview: what do we learn from all this?